Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917922.1_cds_XP_016467469.1_60214
CDS Infomation

[gene=LOC107790082] [db_xref=GeneID:107790082] [protein=F-box/FBD/LRR-repeat protein At5g56420-like isoform X2] [protein_id=XP_016467469.1] [location=complement(join(27940..28257,31864..32007,32094..33014,33449..33580))] [gbkey=CDS]
Sequence

ATGGTGATCTCCAGGGGAAAAGAAATCTTTGAATCTAGTTACTCATGGATTTTTTTAAAA
GTGAGAGGGCATTCCAGTGCATGCCGCATTCACGCAGGGTACGGGGAAGGACCGCACCTC
AAGGAGTGTGATGTTCATGATGCAAAGGAGGATTACTTCAGTCAGCTACCAGATGATGTT
TTGTCTTCCATTCTTGCACATTTGACAGTAGTAGATGCTGCTAGGACGAGCATTTTATCT
AGAAGGTGGAAATATCGCTTTGCCTCTATGCCTACATTACAATTTAGATGCCTTGACATG
TTTGGGATTAAACCTTACAACCATACATGTTGCCCTTACTATCAACAAAAATTCTTGAAA
GGAGTAAATCAGTTATTACAACTTTATACGGGTCGTAAAGTGACTCATGTTAAGATGACT
TTTTGCTTTGGGAGACAGTTTTCTAGTGAATTTGACCAATGGATGCATTCTATTTCAAGA
TTAGGTGTTGAAAGACTATATCTTTCTTTTGATTGTGGTATTAATTATCCCATCCACAAT
TCCAACCCTATCCGTAATTCGGACAAGTTGTTTAAATTTTCCCTTGAGCTTCTATCTCAA
GCATCCTCATTGAAACATTTGCTTTTGTACCATTGTGTTGTCCAATCAAGTATAGGAGTT
CGTCTTAAATCCCTCAGGACCCTTACTTTGCTGGGTGTTCTGTTAGAAAGCGACCAACTT
GAGCGTATTTTTTCCTCTTGTTTGAATCTTAATCTGTTAGAGCTATGCTATTGCAAACTT
CCTTATAAGCTATGGATCTCTGGTACAGTAACATCTGTTGTTTTCTTTGCTTGTGGCGGA
TTGGAAGAGATTGATCTTTGGGCTGCAAATCTTCACTCATTTGAGTGTAACTTCTTTAGC
AAAGTAAGATTTTATTTTTCTTTTGTTCCCATGTTGGAAAATGTAATGATTGATTTAAAA
GGAGCCACTGCAATGCCATACATATTTGGTGATTTTGCAAGAGATTTACCAGCTCAGGTT
AAATCTTTAACAGTCAAAGCTAGTCAGTCTCAGATAGAATACTTCCCAATAAAGACACAG
ATGTTCAGAAACCTTAGGGAGCTAACCTTGGTGCTTGTGTTCACGCACGACTTTGACATA
GTCAACATTTCGCCTATCTTAGGTGTTTGTCCTCTTCTTCAATATTTGGATGTAGTGCAA
TCGAGGACGACAAGGGATGGAAGAGGAAGTGGCATAAGGCCTCCTTTATCTCCTACATAT
CACACTGAACTAAAAGAAGTGACATTTGGTGGATTTCGTGGAACCAGAGCAGAGATTGAA
TTTGCTGTTTATATTCTGAGAAGTGCATTGGTACTTGAACGAATGTTTCTCAGCCCATGT
TTTACATGTTATTCTGGTAGTGGTACATGGGAGAAAACGCGGGGTGTTTCCCTCGATGAA
AGAAAACGTAACTCAATTGAACAAGAACTACATGGGCAAGCTATCTCTAGGAATGCTGTG
GTCATCATCCAATAG

Peptide Sequence

PEP ID

XP_016467469.1
PEP Infomation

PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like isoform X2 [Nicotiana tabacum]
Sequence

MVISRGKEIFESSYSWIFLKVRGHSSACRIHAGYGEGPHLKECDVHDAKEDYFSQLPDDV
LSSILAHLTVVDAARTSILSRRWKYRFASMPTLQFRCLDMFGIKPYNHTCCPYYQQKFLK
GVNQLLQLYTGRKVTHVKMTFCFGRQFSSEFDQWMHSISRLGVERLYLSFDCGINYPIHN
SNPIRNSDKLFKFSLELLSQASSLKHLLLYHCVVQSSIGVRLKSLRTLTLLGVLLESDQL
ERIFSSCLNLNLLELCYCKLPYKLWISGTVTSVVFFACGGLEEIDLWAANLHSFECNFFS
KVRFYFSFVPMLENVMIDLKGATAMPYIFGDFARDLPAQVKSLTVKASQSQIEYFPIKTQ
MFRNLRELTLVLVFTHDFDIVNISPILGVCPLLQYLDVVQSRTTRDGRGSGIRPPLSPTY
HTELKEVTFGGFRGTRAEIEFAVYILRSALVLERMFLSPCFTCYSGSGTWEKTRGVSLDE
RKRNSIEQELHGQAISRNAVVIIQ

Transcript Sequence

Gene sequence data has not been registered.